Skip to contents
-
BuildMultigroupDEGlist()
- Build up a DEG data frame for clusterProfiler multi-group ORA analysis
-
EnrichGT()
- Parse enrichment results and further clustering and visualizing
-
Ranked.GS()
- Return ranked gene list which is use for "GSEA" and "cnetplot" in package "clusterProfiler"
-
compareGT()
- 2-Group Comparison of enrichment results and further clustering and visualizing
-
doGO()
- ORA GO analysis by clusterProfiler by symbol identifiers.
-
doKEGG()
- ORA KEGG analysis by clusterProfiler by symbol identifiers.
-
doRA()
- ORA Reactome analysis by clusterProfiler by symbol identifiers.
-
infering_regulator_act()
- Infering Pathway or Transcript Factors activity from EnrichGT meta-gene modules