Infering Pathway or Transcript Factors activity from EnrichGT meta-gene modules
infering_regulator_act.Rd
Only supports gene symbols. so you must use enrichedObj |> setReadable(OrgDb = xxx,keyType = "ENTREZID") |> EnrichGT() . Do Not supports ENTREZIDs!
[PROGENy](https://saezlab.github.io/progeny/) is a comprehensive resource containing a curated collection of pathways and their target genes, with weights for each interaction.
[CollecTRI](https://github.com/saezlab/CollecTRI) is a comprehensive resource containing a curated collection of TFs and their transcriptional targets compiled from 12 different resources. This collection provides an increased coverage of transcription factors and a superior performance in identifying perturbed TFs compared to our previous.