Return ranked gene list which is use for "GSEA" and "cnetplot" in package "clusterProfiler"

Return ranked gene list which is use for "GSEA" and "cnetplot" in package "clusterProfiler"

Usage

Ranked.GS(Gene, log2FC, FromType = "SYMBOL", OrgDB = org.Hs.eg.db)

Arguments

Gene

A vector containing genes

log2FC

A vector containg log2FC

FromType

default is "SYMBOL"

OrgDB

default as org.Hs.eg.db

Value

A ranked named numeric vector. Names of the numbers is the ENTREZID.

Author

Zhiming Ye