ORA Reactome analysis by clusterProfiler by symbol identifiers.
Usage
doRA(GS, PVal = 0.01, QVal = 0.05, Organism = "human", OrgDB = org.Hs.eg.db)
Arguments
- GS
Gene Symbols for enrichment analysis. NOT ENSEMBL ID.
- PVal
P adjusted value cut off, default 0.01
- QVal
qvalue cut off, default 0.05
- Organism
one of "human", "rat", "mouse", "celegans", "yeast", "zebrafish", "fly".
- OrgDB
default as org.Hs.eg.db
Value
An enrichment result generated by clusterProfiler.